Eighth International Conference on Mathematical Chemistry
and
Fifth Indo-US Workshop on Mathematical Chemistry

With Applications to Drug Discovery, Chemical Risk Assessment,
Cheminformatics, Bioinformatics, Computational Biology and Toxicology

June 22 - 27, 2008
Duluth, Minnesota, USA


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Tentative Program
Time
Activity
Location
Sunday, June 22nd
  Conference participants arrive in Duluth  
12:00pm-6:30pm
Check-in at UMD Residence Housing & on-site registration
Lake Superior Hall
5:30pm-8:00pm
On-site registration (continued)
Campus Center Wedge
6:00pm-8:00pm

Evening reception for conference participants

Campus Center Wedge
Monday, June 23rd
7:00am-9:00am
Breakfast
Residence Dining Center
9:00am-10:15am
Welcome and Inauguration
Campus Center 120
  Kathryn A. Martin, Chancellor, UMD
Vincent Magnuson, Vice Chancellor for Academic Administration, UMD
Gerald Niemi, Director, Center for Water and the Environment, NRRI
Subhash C. Basak, NRRI & ISMC
Bruce Corrie, Dean, Concordia University
Meredith McQuaid, Associate Vice President and Dean for International Programs, UM
Arabinda Mitra, Director, Indo-US Science and Technology Forum
 
10:15am-11:00am
Coffee Break
Campus Center Wedge
11:00am-12:00pm
Inaugural Session–Subhash C. Basak, Chair
Campus Center 120
11:00-12:00
[O18] Apurba Bhattacharjee, Walter Reed Army Institute of Research, Silver Spring, Maryland 20910-7500, USA.
Role of calculated stereo-electronic properties and in silico pharmacophore models in the discovery and design of novel insect repellents.
 
12:00pm-1:30pm
Lunch
Residence Dining Center
1:30pm-2:50pm
General Session 1–George Trachte, UMD Pharmacology, Chair
Campus Center 120
1:30-2:10
[O12] Daniel L. Villeneuve, US EPA Mid-Continent Ecology Division, Duluth, Minnesota, 55804, USA.
Mining minnows: An integrated systems biology approach to link mode of action to ecologically-relevant outcomes.
 
2:10-2:50
[O06] Jose Serrano, USEPA, Office of Research and Development, Duluth, Minnesota, 55804, USA.
Identification of protein biomarkers in plasma of model aquatic species exposed to endocrine disrupters by state-of-the-art proteomic, bioinformatic and computational approaches.
 
2:50pm-3:20pm
Coffee Break
Campus Center Wedge
3:20pm-4:40pm
General Session 1 (continued)
Campus Center 120
3:20-4:00
[O03] Srinand Sreevatsan, University of Minnesota, St. Paul, Minnesota 55108, USA.
Comparative proteomics analysis of Mycobacterium bovis and Mycobacterium avium subsp. paratuberculosis infections.
 
4:00-4:40
[O02] Subhash C. Basak, Natural Resources Research Institute, Duluth, Minnesota 55811, USA.
Chemo-bioinformatics: An integration of molecular structure and “omics” based approaches for predicting bioactivity.
 
5:00pm-6:45pm
Dinner
Residence Dining Center
Tuesday, June 24th
7:00am-9:00am
Breakfast
Residence Dining Center
9:00am-10:20am
Session 2–Paul Siders, UMD Chemistry and Biochemistry, Chair
Campus Center 120
9:00-9:40
[O21] Kevin McLaughlin, Department of Chemistry, University of Wisconsin – River Falls, River Falls, Wisconsin 54022, USA.
Some interesting problems arising from the Hosoya Index.
 
9:40-10:20
[O22] Jerry Ray Dias, Department of Chemistry, University of Missouri, Kansas City, Missouri 64110-2499, USA.
Spectacular regularities in the isomer numbers of select subclasses of benzenoid hydrocarbons and related systems.
 
10:20am-10:40am
Coffee Break
10:40am-12:00pm
Session 2 (continued)
Campus Center 120
10:40-11:20
[O14] Ramanathan Natarajan, Centre for Mathematical Sciences, Arunapuram, Pala, Kerala, India, and Department of Chemical Engineering, Lakehead University, Thunder Bay, Canada P7B5E1.
Numerical characterization molecular chirality.
 
11:20-12:00
[O04] Seymour B. Elk, Elk Technical Associates, New Milford, New Jersey 07646-1203, USA.
Expanding the purview of biparametric nomenclature to include many more molecular rearrangements and selected hetero-atom covalent bondings.
 
12:00pm-1:30pm
Lunch
Residence Dining Center
1:30pm-2:50pm
Session 3–Session Chair TBA
Campus Center 120
1:30-2:10
[O17] Jessica J. Kraker, University of Wisconsin–Eau Claire, Eau Claire, Wisconsin 54702, USA.
Recent directions in predictor selection.
 
2:10-2:50
[O10] Shreekant Deshpande, Medicinal and Process Chemistry Division, Central Drug Research Institute, Lucknow–226 001, India.
Is feature selection essential for ANN modeling.
 
2:50pm-3:20pm
Coffee Break
Campus Center Wedge
3:20pm-4:40pm
Session 3 (continued)
Campus Center 120
3:20-4:00
[O26] Guillermo Restrepo, Laboratorio de Química Teórica, Universidad de Pamplona, Pamplona, Colombia and Department of Mathematics, University of Bayreuth, Bayreuth, Germany.
Turning partial orders into total orders, a step-by-step approach.
 
4:00-4:40
[O13] S.K. Ray, Birla Institute of Technology and Science, Pilani, Goa campus, NH-17B Zuari Nagar, Goa–403726, India.
Mutation at 235th nucleotide replacing GGA to GGG in mutated Myc gene brings the characteristic value of the resultant gene to that of the normal gene down-regulating over-expression and cancer growth: A computational genomic approach.
 
5:00pm-6:45pm
Dinner
Residence Dining Center
7:00pm-9:00pm
Poster Session–Ramanathan Natarajan, Chair
Kirby Ballroom
 

[P01] Bhargavi Kondagari
[P02] Jon Rumbley
[P03] Ramanathan Natarajan
[P04] Jerry Ray Dias
[P05] Ramanathan Natarajan
[P06] Uma Vuruputuri
[P07] Keith Lodge
[P08] Muralidharan Jothi
[P09] Ambarnil Ghosh
[P10] Denise Mills
[P11] Keith Lodge
[P12] Guillermo Restrepo

 
Wednesday, June 25th
7:00am-9:00am
Breakfast
Residence Dining Center
9:00am-10:20am
Session 4–George Vacek, Chair
Campus Center 120
9:00-9:40
[O11] Yoshimasa Takahashi, Department of Knowledge-based Information Engineering, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku-cho, Toyohashi 441-8580, Japan.
Making a structure-activity dictionary based on non-terminal vertex graph (NTG).
 
9:40-10:20
[O19] Michael Wester, Department of Mathematics and Statistics, University of New Mexico, Albuquerque, New Mexico, USA.
Scaffold topologies.
 
10:20am-10:40am
Coffee Break
Campus Center Wedge
10:40am-12:00pm
Session 4 (continued)
Campus Center 120
10:40-11:20
[O01] Rajarshi Guha, School of Informatics, Indiana University, Bloomington, Indiana 47408, USA.
Characterizing the structure activity landscape and implications for predictive modeling and molecular representations.
 
11:20-12:00
[O16] David Stanton, Modeling & Simulations Department, Procter & Gamble, Cincinnati, Ohio 45253, USA.
Optimizing the potency of N-terminal capped tetra-peptide [R-NH-His-D-Phe-Arg-Trp-NH2] agonists of hMC1R: Are we there yet?
 
12:00pm-12:15pm
Group Photo
TBA
12:15pm
Meeting adjourned for the day
12:00pm-1:30pm
Lunch
Residence Dining Center
1:30pm-2:50pm
Session 5–CANCELLED
Campus Center 120
5:00pm-6:45pm
Dinner
Residence Dining Center
Thursday, June 26th
7:00am-9:00am
Breakfast
Residence Dining Center
9:00am-10:20am
Session 6–Venkatram Mereddy, UMD Chemistry and Biochemistry, Chair
Campus Center 120
9:00-9:40
[O15] Gaurav Varshney, Department of Mathematics, Indian Institute of Technology Roorkee, India.
Numerical modeling of drug coating in the arterial stent.
 
9:40-10:20
[O07] Muralidharan Jhoti, Kongunadu Arts and Science College, GN Mills post, Coimbatore-29, Tamilnadu, India.
In silico functional characterization of hypothetical proteins (Rickettsia typhi).
 
10:20am-10:40am
Coffee Break
Campus Center Wedge
10:40am-12:00pm
Session 6 (continued)
Campus Center 120
10:40-11:20
[O20] Jon Rumbley, University of Minnesota Duluth, Duluth, Minnesota 55812, USA.
Searching for complementarity, the organic anion transporting polypeptides (Oatps) and their transport of important endobiotic and xenobiotic substrates.
 
11:20-12:00
[O25] George Vacek, Hewlett-Packard, Duluth, Minnesota 55812, USA.
Trends in high-performance computing in mathematical chemistry and related disciplines.
 
12:00pm-1:30pm
Lunch
Residence Dining Center
1:30pm-3:00pm
Panel Discussion–Apurba Bhattacharjee, Chair
Campus Center 120
Topic: Promises and pitfalls of mathematical approaches to the 'omics sciences for chemical evaluation.  
3:00pm-3:30pm
Coffee Break
Campus Center Wedge
6:00pm-9:00pm
Banquet—Midi Restaurant in the historic Fitger's Brewery Complex along the shore of Lake Superior
Midi Restaurant
Friday, June 27th
7:00am-9:00am
Breakfast
Residence Dining Center
9:00am-10:20am
Session 7–Uma Vuruputuri, Chair
Campus Center 120
9:00-9:40
[O05] Andres Bernal, Grupo de Química Teórica, Universidad Nacional de Colombia, Bogotá DC, Carrera 30 N° 45-03, Bogotá, Colombia.
A hyperdigraphic model of chemical activity: acid-basic behaviour from a network model.
 
9:40-10:20
[O09] Ganapathy S. Natarajan, Department of Mechanical and Industrial Engineering, University of Minnesota Duluth, Duluth, Minnesota 55812, USA.
Intercorrelation of DNA sequence descriptors.
 
10:20am-10:40am
Coffee Break
Campus Center Wedge
10:40am-12:00am
Session 7 (continued)
Campus Center 120
10:40-11:20
[O24] Brian D. Gute, Natural Resources Research Institute, Duluth, Minnesota 55811, USA.
Tailoring molecular similarity methods to optimize activity estimation.
 
11:20pm-12:00pm
Concluding Remarks
Campus Center 120
12:00pm-1:30pm
Lunch
Residence Dining Center
1:30pm
Participants Depart


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