| Tentative Program |
| Time |
Activity |
Location |
| Sunday, June
22nd |
| |
Conference participants arrive in Duluth |
|
12:00pm-6:30pm |
Check-in at UMD Residence Housing & on-site
registration |
Lake Superior Hall |
5:30pm-8:00pm |
On-site registration (continued) |
Campus Center Wedge |
6:00pm-8:00pm |
Evening reception for conference participants |
Campus Center Wedge |
| Monday, June 23rd |
7:00am-9:00am |
Breakfast |
Residence Dining Center |
9:00am-10:15am |
Welcome and Inauguration |
Campus Center 120 |
| |
Kathryn A. Martin, Chancellor, UMD
Vincent Magnuson, Vice Chancellor for Academic Administration, UMD
Gerald Niemi, Director, Center for Water and the Environment, NRRI
Subhash C. Basak, NRRI & ISMC
Bruce Corrie, Dean, Concordia University
Meredith McQuaid, Associate Vice President and Dean for International
Programs, UM
Arabinda Mitra, Director, Indo-US Science and Technology Forum |
|
10:15am-11:00am |
Coffee Break |
Campus Center Wedge |
11:00am-12:00pm |
Inaugural Session–Subhash C. Basak, Chair |
Campus Center 120 |
11:00-12:00 |
[O18] Apurba Bhattacharjee, Walter
Reed Army Institute of Research, Silver Spring, Maryland 20910-7500,
USA.
Role of calculated stereo-electronic properties and in silico pharmacophore
models in the discovery and design of novel insect repellents. |
|
12:00pm-1:30pm |
Lunch |
Residence Dining Center |
1:30pm-2:50pm |
General Session 1–George Trachte, UMD Pharmacology,
Chair |
Campus Center 120 |
1:30-2:10 |
[O12] Daniel L. Villeneuve, US EPA Mid-Continent
Ecology Division, Duluth, Minnesota, 55804, USA.
Mining minnows: An integrated systems biology approach to link mode
of action to ecologically-relevant outcomes. |
|
2:10-2:50 |
[O06] Jose Serrano, USEPA, Office of Research and
Development, Duluth, Minnesota, 55804, USA.
Identification of protein biomarkers in plasma of model aquatic species
exposed to endocrine disrupters by state-of-the-art proteomic, bioinformatic
and computational approaches. |
|
2:50pm-3:20pm |
Coffee Break |
Campus Center Wedge |
3:20pm-4:40pm |
General Session 1 (continued) |
Campus Center 120 |
3:20-4:00 |
[O03] Srinand Sreevatsan, University
of Minnesota, St. Paul, Minnesota 55108, USA.
Comparative proteomics analysis of Mycobacterium bovis and Mycobacterium
avium subsp. paratuberculosis infections. |
|
4:00-4:40 |
[O02] Subhash C. Basak, Natural
Resources Research Institute, Duluth, Minnesota 55811, USA.
Chemo-bioinformatics: An integration of molecular structure and “omics” based
approaches for predicting bioactivity. |
|
5:00pm-6:45pm |
Dinner |
Residence Dining Center |
| Tuesday, June 24th |
7:00am-9:00am |
Breakfast |
Residence Dining Center |
9:00am-10:20am |
Session 2–Paul Siders, UMD Chemistry and
Biochemistry, Chair |
Campus Center 120 |
9:00-9:40 |
[O21] Kevin McLaughlin, Department of Chemistry,
University of Wisconsin – River Falls, River Falls, Wisconsin
54022, USA.
Some interesting problems arising from the Hosoya Index. |
|
9:40-10:20 |
[O22] Jerry Ray Dias, Department of Chemistry,
University of Missouri, Kansas City, Missouri 64110-2499, USA.
Spectacular regularities in the isomer numbers of select subclasses
of benzenoid hydrocarbons and related systems. |
|
10:20am-10:40am |
Coffee Break |
|
10:40am-12:00pm |
Session 2 (continued) |
Campus Center 120 |
10:40-11:20 |
[O14] Ramanathan Natarajan, Centre for Mathematical
Sciences, Arunapuram, Pala, Kerala, India, and Department of Chemical
Engineering, Lakehead University, Thunder Bay, Canada P7B5E1.
Numerical characterization molecular chirality. |
|
11:20-12:00 |
[O04] Seymour B. Elk, Elk Technical Associates,
New Milford, New Jersey 07646-1203, USA.
Expanding the purview of biparametric nomenclature to include many
more molecular rearrangements and selected hetero-atom covalent bondings. |
|
12:00pm-1:30pm |
Lunch |
Residence Dining Center |
1:30pm-2:50pm |
Session 3–Session Chair TBA |
Campus Center 120 |
1:30-2:10 |
[O17] Jessica J. Kraker, University of Wisconsin–Eau
Claire, Eau Claire, Wisconsin 54702, USA.
Recent directions in predictor selection. |
|
2:10-2:50 |
[O10] Shreekant Deshpande, Medicinal and Process
Chemistry Division, Central Drug Research Institute, Lucknow–226
001, India.
Is feature selection essential for ANN modeling. |
|
| 2:50pm-3:20pm |
Coffee Break |
Campus Center Wedge |
3:20pm-4:40pm |
Session 3 (continued) |
Campus Center 120 |
3:20-4:00 |
[O26] Guillermo Restrepo, Laboratorio de Química
Teórica, Universidad de Pamplona, Pamplona, Colombia and Department
of Mathematics, University of Bayreuth, Bayreuth, Germany.
Turning partial orders into total orders, a step-by-step approach. |
|
4:00-4:40 |
[O13] S.K. Ray, Birla Institute of Technology and
Science, Pilani, Goa campus, NH-17B Zuari Nagar, Goa–403726,
India.
Mutation at 235th nucleotide replacing GGA to GGG in mutated Myc
gene brings the characteristic value of the resultant gene to that
of the normal gene down-regulating over-expression and cancer growth:
A computational genomic approach. |
|
5:00pm-6:45pm |
Dinner |
Residence Dining Center |
7:00pm-9:00pm |
Poster Session–Ramanathan Natarajan, Chair |
Kirby Ballroom |
| |
[P01] Bhargavi Kondagari
[P02] Jon Rumbley
[P03] Ramanathan Natarajan
[P04] Jerry Ray Dias
[P05] Ramanathan Natarajan
[P06] Uma Vuruputuri
[P07] Keith Lodge
[P08] Muralidharan Jothi
[P09] Ambarnil Ghosh
[P10] Denise Mills
[P11] Keith Lodge
[P12] Guillermo Restrepo
|
|
| Wednesday, June 25th |
7:00am-9:00am |
Breakfast |
Residence Dining Center |
9:00am-10:20am |
Session 4–George Vacek, Chair |
Campus Center 120 |
9:00-9:40 |
[O11] Yoshimasa Takahashi, Department of Knowledge-based
Information Engineering, Toyohashi University of Technology, 1-1
Hibarigaoka, Tempaku-cho, Toyohashi 441-8580, Japan.
Making a structure-activity dictionary based on non-terminal vertex
graph (NTG). |
|
9:40-10:20 |
[O19] Michael Wester, Department of Mathematics
and Statistics, University of New Mexico, Albuquerque, New Mexico,
USA.
Scaffold topologies. |
|
10:20am-10:40am |
Coffee Break |
Campus Center Wedge |
10:40am-12:00pm |
Session 4 (continued) |
Campus Center 120 |
10:40-11:20 |
[O01] Rajarshi Guha, School of Informatics, Indiana
University, Bloomington, Indiana 47408, USA.
Characterizing the structure activity landscape and implications
for predictive modeling and molecular representations. |
|
11:20-12:00 |
[O16] David Stanton, Modeling & Simulations
Department, Procter & Gamble, Cincinnati, Ohio 45253, USA.
Optimizing the potency of N-terminal capped tetra-peptide [R-NH-His-D-Phe-Arg-Trp-NH2]
agonists of hMC1R: Are we there yet? |
|
12:00pm-12:15pm |
Group Photo |
TBA |
12:15pm |
Meeting adjourned for the day |
|
12:00pm-1:30pm |
Lunch |
Residence Dining Center |
1:30pm-2:50pm |
Session 5–CANCELLED |
Campus Center 120 |
5:00pm-6:45pm |
Dinner |
Residence Dining Center |
| Thursday, June 26th
|
7:00am-9:00am |
Breakfast |
Residence Dining Center |
9:00am-10:20am |
Session 6–Venkatram Mereddy, UMD Chemistry
and Biochemistry, Chair |
Campus Center 120 |
9:00-9:40 |
[O15] Gaurav Varshney, Department
of Mathematics, Indian Institute of Technology Roorkee, India.
Numerical modeling of drug coating in the arterial stent. |
|
9:40-10:20 |
[O07] Muralidharan Jhoti, Kongunadu
Arts and Science College, GN Mills post, Coimbatore-29, Tamilnadu,
India.
In silico functional characterization of hypothetical proteins (Rickettsia
typhi). |
|
10:20am-10:40am |
Coffee Break |
Campus Center Wedge |
| 10:40am-12:00pm |
Session 6 (continued) |
Campus Center 120 |
10:40-11:20 |
[O20] Jon Rumbley, University of Minnesota Duluth,
Duluth, Minnesota 55812, USA.
Searching for complementarity, the organic anion transporting polypeptides
(Oatps) and their transport of important endobiotic and xenobiotic
substrates. |
|
11:20-12:00 |
[O25] George Vacek, Hewlett-Packard, Duluth, Minnesota
55812, USA.
Trends in high-performance computing in mathematical chemistry and
related disciplines. |
|
12:00pm-1:30pm |
Lunch |
Residence Dining Center |
1:30pm-3:00pm |
Panel Discussion–Apurba Bhattacharjee, Chair |
Campus Center 120 |
|
Topic: Promises and pitfalls of mathematical
approaches to the 'omics sciences for chemical evaluation. |
|
| 3:00pm-3:30pm |
Coffee Break |
Campus Center Wedge |
6:00pm-9:00pm |
Banquet—Midi Restaurant in the historic
Fitger's Brewery Complex along the shore of Lake Superior |
Midi Restaurant |
| Friday, June 27th
|
7:00am-9:00am |
Breakfast |
Residence Dining Center |
9:00am-10:20am |
Session 7–Uma Vuruputuri, Chair |
Campus Center 120 |
9:00-9:40 |
[O05] Andres Bernal, Grupo de Química Teórica,
Universidad Nacional de Colombia, Bogotá DC, Carrera 30 N° 45-03,
Bogotá, Colombia.
A hyperdigraphic model of chemical activity: acid-basic behaviour
from a network model. |
|
9:40-10:20 |
[O09] Ganapathy S. Natarajan, Department of Mechanical
and Industrial Engineering, University of Minnesota Duluth, Duluth,
Minnesota 55812, USA.
Intercorrelation of DNA sequence descriptors. |
|
10:20am-10:40am |
Coffee Break |
Campus Center Wedge |
| 10:40am-12:00am |
Session 7 (continued) |
Campus Center 120 |
10:40-11:20 |
[O24] Brian D. Gute, Natural Resources Research
Institute, Duluth, Minnesota 55811, USA.
Tailoring molecular similarity methods to optimize activity estimation. |
|
11:20pm-12:00pm |
Concluding Remarks |
Campus Center 120 |
12:00pm-1:30pm |
Lunch |
Residence Dining Center |
1:30pm |
Participants Depart |
|
|